منابع مشابه
PDP: protein domain parser
UNLABELLED We have developed a program for automatic identification of domains in protein three-dimensional structures. Performance of the program was assessed by three different benchmarks: (i) by comparison with the expert-curated SCOP database of structural domains; (ii) by comparison with a collection of manual domain assignments; and (iii) by comparison with a set of 55 proteins, frequentl...
متن کاملPDP-CON: prediction of domain/linker residues in protein sequences using a consensus approach.
The prediction of domain/linker residues in protein sequences is a crucial task in the functional classification of proteins, homology-based protein structure prediction, and high-throughput structural genomics. In this work, a novel consensus-based machine-learning technique was applied for residue-level prediction of the domain/linker annotations in protein sequences using ordered/disordered ...
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General patterns of protein structural organization have emerged from studies of hundreds of structures elucidated by X-ray crystallography and nuclear magnetic resonance. Structural units are commonly identified by visual inspection of molecular models using qualitative criteria. Here, we propose an algorithm for identification of structural units by objective, quantitative criteria based on a...
متن کاملFig.1 Pdp Module Drive Circuit Pdp Scan Driver Ic
A shift in consumer electronics from analog to digital technology is underway, and the television industry is transitioning from CRT to flat panel display (FPD) technology. With the increasing popularity of FPDs, the market for plasma display panels (PDPs) has also grown rapidly. The FPD market is divided according to screen size: sizes of 30 inches and smaller use liquid crystal display (LCD) ...
متن کاملParser-Based Retraining for Domain Adaptation of Probabilistic Generators
While the effect of domain variation on Penntreebank-trained probabilistic parsers has been investigated in previous work, we study its effect on a Penn-Treebank-trained probabilistic generator. We show that applying the generator to data from the British National Corpus results in a performance drop (from a BLEU score of 0.66 on the standard WSJ test set to a BLEU score of 0.54 on our BNC test...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2003
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btg006